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IDSymbolCommon_NameChemical_FormulaNucleoside_MassDescription
36putThyα-putrescinylthymineC9H16N4O2212.25
An N-substituted putrescine that is thymine in which a hydrogen of the methyl group has been replaced by one of the amino groups of putrescine.
371mT1,5-dimethyluracilC6H8N2O2140.14
A pyrimidone that is uracil with methyl group substituents at positions 1 and 5
383mT3,5-dimethyluracilC6H8N2O2140.14
A pyrimidone that is uracil with methyl group substituents at positions 3 and 5
39O4-meTO(4)-methylthymineC6H8N2O2140.14
A methylthymine in which the methyl group is located at the O4-position
40diHT5,6-dihydrothymineC5H8N2O2128.13
A pyrimidone obtained by formal addition of hydrogen across the 5,6-position of thymine.
415hmU5-hydroxymethyluracilC5H6N2O3142.11
A primary alcohol that is uracil bearing a hydroxymethyl substituent at the 5-position.
425fU5-formyluracilC5H4N2O3140.1
A pyrimidone resulting from the formal oxidation of the alcoholic hydroxy group of 5-hydroxymethyluracil to the corresponding aldehyde. It is a major one-electron photooxidation product of thymine in oligodeoxynucleotides.
43base J(beta-D-glucopyranosyloxymethyl)deoxyuridine 5'-monophosphateC16H25N2O14P500.35
A pyrimidine 2'-deoxyribonucleoside 5'-monophosphate having beta-D-glucopyranosyloxymethyluracil (base J) as the nucleobase
44dhpUra5-(4,5-dihydroxypentyl)uracilC9H14N2O4214.22
A nucleobase analogue that is uracil substituted at position 5 by a 4,5-dihydroxypentyl group.
455caUuracil-5-carboxylic acidC5H4N2O4156.1
465-NeOmdU5-(2-aminoethoxy)methyl-2'-deoxyuridineC12H19N3O6301.3
A pyrimidine 2'-deoxyribonucleoside that is 5-hydroxymethyl-2'-deoxyuridine in which the hydroxymethyl group at position 5 has been formally converted to the corresponding 2-aminoethyl ether. It is a thymidine hypermodification replacing 40% of thymidine nucleotides in the Salmonellaphage ViI.
47dU2'-deoxyuridineC9H12N2O5228.2
A pyrimidine 2'-deoxyribonucleoside having uracil as the nucleobase
48DHdU5,6-dihydroxy-2'-deoxyuridineC9H12N2O7260.2
A pyrimidine 2'-deoxyribonucleoside having 5,6-dihydroxyuracil as the nucleobase
495-NedU5-(2-aminoethyl)-2'-deoxyuridineC11H17N3O5271.27
A pyrimidine 2'-deoxyribonucleoside that is 2'-deoxyuridine in which the hydrogen at position 5 has been replaced by a 2-aminoethyl group. It is a thymidine hypermodification replacing 30% of thymidine in the DNA of the Pseudomonas phage M6.
50dhpdU2'-deoxy-5-(4,5-dihydroxypentyl)uridineC14H22N2O7330.34
A pyrimidine 2'-deoxyribonucleoside having 5-(4,5-dihydroxypentyl)uracil as the nucleobase