ID | Symbol | Common_Name | Chemical_Formula | Nucleoside_Mass | Description |
36 | putThy | α-putrescinylthymine | C9H16N4O2 | 212.25 | An N-substituted putrescine that is thymine in which a hydrogen of the methyl group has been replaced by one of the amino groups of putrescine. |
37 | 1mT | 1,5-dimethyluracil | C6H8N2O2 | 140.14 | A pyrimidone that is uracil with methyl group substituents at positions 1 and 5 |
38 | 3mT | 3,5-dimethyluracil | C6H8N2O2 | 140.14 | A pyrimidone that is uracil with methyl group substituents at positions 3 and 5 |
39 | O4-meT | O(4)-methylthymine | C6H8N2O2 | 140.14 | A methylthymine in which the methyl group is located at the O4-position |
40 | diHT | 5,6-dihydrothymine | C5H8N2O2 | 128.13 | A pyrimidone obtained by formal addition of hydrogen across the 5,6-position of thymine. |
41 | 5hmU | 5-hydroxymethyluracil | C5H6N2O3 | 142.11 | A primary alcohol that is uracil bearing a hydroxymethyl substituent at the 5-position. |
42 | 5fU | 5-formyluracil | C5H4N2O3 | 140.1 | A pyrimidone resulting from the formal oxidation of the alcoholic hydroxy group of 5-hydroxymethyluracil to the corresponding aldehyde. It is a major one-electron photooxidation product of thymine in oligodeoxynucleotides. |
43 | base J | (beta-D-glucopyranosyloxymethyl)deoxyuridine 5'-monophosphate | C16H25N2O14P | 500.35 | A pyrimidine 2'-deoxyribonucleoside 5'-monophosphate having beta-D-glucopyranosyloxymethyluracil (base J) as the nucleobase |
44 | dhpUra | 5-(4,5-dihydroxypentyl)uracil | C9H14N2O4 | 214.22 | A nucleobase analogue that is uracil substituted at position 5 by a 4,5-dihydroxypentyl group. |
45 | 5caU | uracil-5-carboxylic acid | C5H4N2O4 | 156.1 | |
46 | 5-NeOmdU | 5-(2-aminoethoxy)methyl-2'-deoxyuridine | C12H19N3O6 | 301.3 | A pyrimidine 2'-deoxyribonucleoside that is 5-hydroxymethyl-2'-deoxyuridine in which the hydroxymethyl group at position 5 has been formally converted to the corresponding 2-aminoethyl ether. It is a thymidine hypermodification replacing 40% of thymidine nucleotides in the Salmonellaphage ViI. |
47 | dU | 2'-deoxyuridine | C9H12N2O5 | 228.2 | A pyrimidine 2'-deoxyribonucleoside having uracil as the nucleobase |
48 | DHdU | 5,6-dihydroxy-2'-deoxyuridine | C9H12N2O7 | 260.2 | A pyrimidine 2'-deoxyribonucleoside having 5,6-dihydroxyuracil as the nucleobase |
49 | 5-NedU | 5-(2-aminoethyl)-2'-deoxyuridine | C11H17N3O5 | 271.27 | A pyrimidine 2'-deoxyribonucleoside that is 2'-deoxyuridine in which the hydrogen at position 5 has been replaced by a 2-aminoethyl group. It is a thymidine hypermodification replacing 30% of thymidine in the DNA of the Pseudomonas phage M6. |
50 | dhpdU | 2'-deoxy-5-(4,5-dihydroxypentyl)uridine | C14H22N2O7 | 330.34 | A pyrimidine 2'-deoxyribonucleoside having 5-(4,5-dihydroxypentyl)uracil as the nucleobase |